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Tests/Models/Transduction/Hair_Cell


Carney1SG.par
	1		Random number seed.
	1		Number of fibres.
	0.05e-3	Excitary post-synaptic pulse duration (s).
	1.0		Pulse magnitude (nA?).
	0.75e-3	Refractory period (seconds).
	100		Maximum threshold increase following discharge, Hmax (spikes/s).
	0.55	Coefficient for discharge history effect, c0 (s).
	0.45	Coefficient for discharge history effect, c1 (s).
	0.0008	Time constant for discharge history effect, s0 (s).
	0.025	Time constant for discharge history effect, s1 (s).
	

Carney1k.par
	4			Order for the gamma tone filters - BM model.
	single		Centre frequency mode for filter.
	1000.0		Centre frequency of gamma-tone filter bank.
	1100		Cut-off frequency for OHC low-pass filter, Fc (Hz).
	5000		Operating point of OHC (feedback) non-linearity, P_Dfb (Pa).
	0.462		Asymmetrical bias for OHC non-linearity, P0 (rad).
	10.0		Maximum depolarising hair cell voltage, Vmax (V).
	

Carney4k.par
	4			Order for the gamma tone filters - BM model.
	single		Centre frequency mode for filter.
	4000.0		Centre frequency of gamma-tone filter bank.
	1100		Cut-off frequency for OHC low-pass filter, Fc (Hz).
	5000		Operating point of OHC (feedback) non-linearity, P_Dfb (Pa).
	0.462		Asymmetrical bias for OHC non-linearity, P0 (rad).
	10.0		Maximum depolarising hair cell voltage, Vmax (V).
	

CarneyIHC1.par
	10.0	Maximum depolarising hair cell voltage, Vmax (V).
	70.0	Resting release from synapse, R0 (spikes/s).
	0.015	Resting permeability, Prest ("volume"/s).
	0.08	Maximum global permeability, PGmax ("volume"/s).
	0.1		Maximum local permeability, PLmax ("volume"/s).
	1.5		Maximum immediate permeability, PImax ("volume"/s).
	0.003	Maximum local volume, VLmax ("volume").
	0.001	Minimum local volume, VLmin ("volume").
	0.0003	Maximum immediate volume, VImax ("volume").
	0.0001	Minimum immediate volume, VLmin ("volume").
	

CarneyRP1.par
	1100		Cut-off frequency for OHC low-pass filter, Fc (Hz).
	1000		Operating point of OHC (feedback) non-linearity, P_Dihc (uPa).
	0.462		Asymmetrical bias for OHC non-linearity, P0 (rad).
	10.0		Maximum depolarising hair cell voltage, Vmax (V).
	8.13e-3		Travelling wave delay coefficient, A_D (s).
	6.49e-3		Travelling wave delay length constant, A_L (m).
	0.0			Reference potential (V).
	

Cooke91.par
	100.0	Crawford and Fettiplace c value.
	24.0	Release fraction.
	6.0		Replenishment (refill) fraction.
	50.0	Desired spontaneous firing rate (spikes/s).
	1000.0	Maximum possible firing rate (spikes/s).
	

CookeAM1k.par
	single		Centre frequency mode for filter.
	1000.0		Initial centre frequency of gamma-tone filter bank.
	ERB			Band width (3 dB down) mode for filters.
	1.019		ERB Bandwidth correction 4th order.
	AMP			Output option (BM, POW, AMP). 
	

DRNL18k.par
	4		Total order for the gamma tone filters - BM model.
	single	Frequency mode.
	18000.0	Centre frequency of gamma-tone filter for basilar membrane.
	Nonlinear	Band width (3 dB down) mode for filters.
	1.0		Narrow filter broadening coefficient.
	15.47	Threshold above which compression takes place (dB SPL).
	0.63	Compression ratio.
	1.0		Wide filter broadening coefficient.
	2.5		Narrow filter low-pass cut-off scale.
	

DRNL1k.par
	4		Total order for the gamma tone filters - BM model.
	single	Frequency mode.
	1000.0	Centre frequency of gamma-tone filter for basilar membrane.
	Nonlinear	Band width (3 dB down) mode for filters.
	1.0		Narrow filter broadening coefficient.
	15.47	Threshold above which compression takes place (dB SPL).
	0.63	Compression ratio.
	1.0		Wide filter broadening coefficient.
	2.5		Narrow filter low-pass cut-off scale.
	

DRNL8k.par
	4		Total order for the gamma tone filters - BM model.
	single	Frequency mode.
	8000.0	Centre frequency of gamma-tone filter for basilar membrane.
	Nonlinear	Band width (3 dB down) mode for filters.
	1.0		Narrow filter broadening coefficient.
	15.47	Threshold above which compression takes place (dB SPL).
	0.63	Compression ratio.
	1.0		Wide filter broadening coefficient.
	2.5		Narrow filter low-pass cut-off scale.
	

FindBin1.par
	max_value	Search mode - min_value, min_index, max_value, max_index.
	1.0e-3		Bin width (time window) for bin (s).
	0.0			Time from which to start search (s).
	10.0e-3		Time range search (s).
	

GPigChinPE.par
	2		Filter order.
	0.0		Pre-attenuation for filter (dB).
	1000.0	Lower, 3 dB down cut-off frequency (Hz).
	30000.0	Upper, 3 dB down cut-off frequency (Hz).
	

Histogm1.par
	continuous	Collection mode - "spike" detection or "continuous" signal.
	PSTH		Histogram type - PSTH or PH.
	0.5			Event threshold for bin counts (units as appropriate).
	0.01e-3		Bin width for the histogram (s).
	1.0e-3		Period for period histogram (s).
	2.5e-3		Offset for histogram - delay before collecting (s).
	

Histogm2.par
	continuous	Collection mode - "spike" detection or "continuous" signal.
	PSTH		Histogram type - PSTH or PH.
	0.5			Event threshold for bin counts (units as appropriate).
	-1			Bin width for the histogram (s).
	1.0e-3		Period for period histogram (s).
	0.0e-3		Offset for histogram - delay before collecting (s).
	

Histogm3.par
	0			Collection mode (0 - reset to zero at each run, 1 - aggregate).
	1			Detection mode: 0 - spike detection, 1 - continuous signal.
	0			Histogram type: 0 - PSTH, 1 - PH.
	0.5			Event threshold for bin counts (units as appropriate).
	1.0e-3		Bin width for the histogram (s).
	1.0e-3		Period for period histogram (s).
	0.0e-3		Offset for histogram - delay before collecting (s).
	

Histogm4.par
	spike		Collection mode - "spike" detection or "continuous" signal.
	PSTH		Histogram type - PSTH or PH.
	0.5			Event threshold for bin counts (units as appropriate).
	-1			Bin width for the histogram (s).
	1.0e-3		Period for period histogram (s).
	0.0e-3		Offset for histogram - delay before collecting (s).
	

MPTone1.par
	2		Number of pure tones.
	
	#Frequency	Intensity	Phase
	#  (Hz)		 (dB SPL)	(degrees)
	8000.0		21.0		0.0		Probe tone (Hz, dB SPL, phase).
	1.0			0.0			0.0		Test tone (Hz, dB SPL, phase).
	
	50.0e-3	Stimulus signal duration (seconds).
	0.01e-3	Stimulus sampling interval, dt (seconds).
	

MPTone2.par
	2		Number of pure tones.
	
	#Frequency	Intensity	Phase
	#  (Hz)		 (dB SPL)	(degrees)
	4000.0		21.0		0.0		Probe tone (Hz, dB SPL, phase).
	1.0			0.0			0.0		Test tone (Hz, dB SPL, phase).
	
	50.0e-3	Stimulus signal duration (seconds).
	0.01e-3	Stimulus sampling interval, dt (seconds).
	

Medd86HSR.par
	240.0		Permeability constant A (units per second).
	5000.0		Permeability constant B (units per second).
	500.0		Release rate, g (units per second).
	5.05		Replenishment rate, y (units per second).
	1650.0		Loss rate, l (units per second).
	170.0		Reprocessing rate, x (units per second).
	8500.0		Recovery rate, r (units per second).
	1.0			Max. no. of transmitter packets in free pool, M.
	50000.0		Firing rate (spikes per second), h.
	

Medd86LSR.par
	700.0		Permeability constant A (units per second).
	6000000.0	Permeability constant B (units per second).
	500.0		Release rate, g (units per second).
	5.05		Replenishment rate, y (units per second).
	1650.0		Loss rate, l (units per second).
	170.0		Reprocessing rate, x (units per second).
	8500.0		Recovery rate, r (units per second).
	1.0			Max. no. of transmitter packets in free pool, M.
	50000.0		Firing rate (spikes per second), h.
	

Medd86MSR.par
	240.0		Permeability constant A (units per second).
	5000.0		Permeability constant B (units per second).
	500.0		Release rate, g (units per second).
	5.05		Replenishment rate, y (units per second).
	1650.0		Loss rate, l (units per second).
	170.0		Reprocessing rate, x (units per second).
	8500.0		Recovery rate, r (units per second).
	1.0			Max. no. of transmitter packets in free pool, M.
	50000.0		Firing rate (spikes per second), h.
	

Medd86aH.par
	1.0		Max. no. of transmitter packets in free pool.
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	50000.0		Firing rate (spikes per second).
	800.0		Permeability constant, h.
	8.6538e+10	Permeability constant, z.
		
	

Medd86aL.par
	1.0			Max. no. of transmitter packets in free pool.
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	50000.0		Firing rate (spikes per second).
	1000.0		Permeability constant, h.
	8.6302e+9	Permeability constant, z.
		
	

Medd86aM.par
	1.0			Max. no. of transmitter packets in free pool.
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	50000.0		Firing rate (spikes per second).
	900.0		Permeability constant, h.
	6.3028e+10	Permeability constant, z.
		
	

Medd95H.par
	11.0		Max. no. of transmitter packets in free pool.
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	800.0		Permeability constant, h.
	8.6538e+10	Permeability constant, z.
		
	

Medd95L.par
	11.0		Max. no. of transmitter packets in free pool.
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	1000.0		Permeability constant, h.
	8.6302e+9	Permeability constant, z.
		
	

Medd95M.par
	11.0		Max. no. of transmitter packets in free pool.
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	900.0		Permeability constant, h.
	6.3028e+10	Permeability constant, z.
		
	

Meddis86.par
	100.0		Permeability constant A (units per second).
	6000.0		Permeability constant B (units per second).
	2000.0		Release rate (units per second).
	5.05		Replenishment rate (units per second).
	2500.0		Loss rate (units per second).
	66.31		Reprocessing rate (units per second).
	6580.0		Recovery rate (units per second).
	1.0			Max. no. of transmitter packets in free pool.
	50000.0		Firing rate (spikes per second).
	

MeddisRP1.par
	1.564	Q parameter.
	0.015	V parameter.
	0.55e-3	Potassium channel time constant (s).
	

PTone1.par
	1000.0		Stimulus frequency (Hz).
	50.0		Stimulus signal intensity (dB SPL).
	100.0e-3	Stimulus signal duration (seconds).
	0.005e-3	Stimulus sampling interval, dt (seconds).
	

PTone2.par
	1000.0		Stimulus frequency (Hz).
	50.0		Stimulus signal intensity (dB SPL).
	300.0e-3	Stimulus signal duration (seconds).
	0.05e-3		Stimulus sampling interval, dt (seconds).
	

PTone3.par
	1000.0		Stimulus frequency (Hz).
	90.0		Stimulus signal intensity (dB SPL).
	300.0e-3	Stimulus signal duration (seconds).
	0.01e-3		Stimulus sampling interval, dt (seconds).
	

PTone4.par
	18000.0		Stimulus frequency (Hz).
	90.0		Stimulus signal intensity (dB SPL).
	300.0e-3	Stimulus signal duration (seconds).
	0.01e-3		Stimulus sampling interval, dt (seconds).
	

PreEmph1.par
	2		Filter order.
	0.0		Pre-attenuation for filter (dB).
	450.0	Lower, 3 dB down cut-off frequency (Hz).
	8500.0	Upper, 3 dB down cut-off frequency (Hz).
	

ShammaRP1.par
	100e-3		Endocochlear potential, Et (V).
	-0.084		Reversal potential, Ek (V).
	0.04		Reversal potential correction, Rp/(Rt+Rp).
	6.21e-12	Total capacitance, C = Ca + Cb (F).
	4.30e-9		Resting conductance, G0 (S).
	1.07e-8		Potassium conductance, Gk (S = Siemens).
	4.18e-9		Maximum mechanical conductance, Gmax (S).
	0.25		Beta constant, exp(-G1/RT).
	10e+6		Gamma constant, Z1/RT (/m).
	3.0e-4		Cilia/BM time constant (s)
	-177.5		Cilia/BM coupling gain, C (dB).
	0.0			Reference potential (V).
	

SpikeGn2.par
	1		Random number seed.
	1		Number of fibres.
	0.02e-3	Pulse duration (s).
	1.0		Pulse magnitude (nA?).
	1e-3	Refractory period (seconds).
	

BinomSG1.par
	1		Number of fibres.
	1		Random number seed.
	0.02e-3	Pulse duration (s).
	1.0		Pulse magnitude (nA?).
	1.0e-3	Refractory period (s).
	

GPig1ChinPE.par
	2		Filter order.
	-13.33	Pre-attenuation for filter (dB).
	1000.0	Lower, 3 dB down cut-off frequency (Hz).
	30000.0	Upper, 3 dB down cut-off frequency (Hz).
	

SpikeGn1.par
	1		Random number seed.
	1		Number of fibres.
	0.05e-3	Pulse duration (s).
	1.0		Pulse magnitude (nA?).
	1e-3	Refractory period (seconds).
	


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