previous next Up Title Contents

Tests/Combinations/ParFiles/NC


AKBushy.par
	2.0e-3		Cell membrane time-constant, tm (s).
	2.0e-3		Potassium decay time-constant, tGk (s).
	2.0e-3		Threshold time-constant, tTh (s).
	0.95		Accommodation constant, c (dimensionless).
	1.75e-3		Delayed rectifier postassium conductance, b (nano-Siemens).
	1.25		Cell resting Threshold, Th0 (mV).
	30.0		Action potential (mV).
	0.75		Non-linear voltage constant, Vnl (mV).
	-65.0		Reversal potential of the potassium conductance, Ek (mV).
	-65.0		Reversal potential of all other conductances, Eb (mV).
	0.022		Resting potassium conductance, gk (nS).
	0.022		Resting component of all other conductances, gb (nS).
	

AKFusiform.par
	12.0e-3		Cell membrane time-constant, tm (s).
	7.5e-3		Potassium decay time-constant, tGk (s).
	1.0e-3		Threshold time-constant, tTh (s).
	0.0			Accommodation constant, c (dimensionless).
	1.0e-3		Delayed rectifier postassium conductance, b (nano-Siemens).
	11.5		Cell resting Threshold, Th0 (mV).
	60.0		Action potential (mV).
	-0.5		Non-linear voltage constant, Vnl (mV).
	-65.0		Reversal potential of the potassium conductance, Ek (mV).
	-65.0		Reversal potential of all other conductances, Eb (mV).
	0.002		Resting potassium conductance, gk (nS).
	0.002		Resting component of all other conductances, gb (nS).
	
	

AKSpiralG1.par
	2.0e-3		Cell membrane time-constant, tm (s).
	0.9e-3		Potassium decay time-constant, tGk (s).
	20.0e-3		Threshold time-constant, tTh (s).
	0.3			Accommodation constant, c (dimensionless).
	0.00025		Delayed rectifier postassium conductance, b (nano-Siemens).
	10.0		Cell resting Threshold, Th0 (mV).
	50.0		Action potential (mV).
	0.5			Non-linear voltage constant, Vnl (mV).
	-65.0		Reversal potential of the potassium conductance, Ek (mV).
	-65.0		Reversal potential of all other conductances, Eb (mV).
	0.02		Resting potassium conductance, gk (nS).
	0.0			Resting component of all other conductances, gb (nS).
	

AKStellate.par
	5.0e-3		Cell membrane time-constant, tm (s).
	2.0e-3		Potassium decay time-constant, tGk (s).
	2.0e-3		Threshold time-constant, tTh (s).
	0.0			Accommodation constant, c (dimensionless).
	0.00025		Delayed rectifier postassium conductance, b (nano-Siemens).
	12.0		Cell resting Threshold, Th0 (mV).
	50.0		Action potential (mV).
	0.5			Non-linear voltage constant, Vnl (mV).
	-65.0		Reversal potential of the potassium conductance, Ek (mV).
	-65.0		Reversal potential of all other conductances, Eb (mV).
	0.02		Resting potassium conductance, gk (nS).
	0.0			Resting component of all other conductances, gb (nS).
	

Dendrit1.par
	normal	output mode for model ("normal" or "scaled").
	5000.0	Cut-off frequency (3 dB down point - Hz).
	1.0		Signal multiplier scale (scaled mode only).
	

Dendrit2.par
	scaled	output mode for model ("normal" or "scaled").
	300.0	Cut-off frequency (3 dB down point - Hz).
	33.0	Signal multiplier scale (scaled mode only).
	

HHDCN1.par
	#HHDCN1.par
	normal		Operation mode ("normal" or "voltage clamp").
	on			Injection mode ("on" or "off").
	-0.010		Excitatory reversal potential (V).
	-0.010		Inhibitory reversal potential (V).
	80.0e-12		Cell capacitance (Farads).
	100e-3		Resting signal duration - used when finding V0(s).
	1e-8		Resting criteria, dV (V).
	
	# Ion channel parameters
	off			Print ion channel tables mode ("on" or "off").
	25e-9		Base leakage conductance (S).
	-0.017		Leakage equilibrium potential (V).
	User		Ion channel mode ("User", later we'll have "wood" too).
	3			Number of ion channel files.
	:ParFiles:NC:IonChans:NaPConnr1.par	Sodium ion channel format file.
	:ParFiles:NC:IonChans:KPConnr1.par	Potassium ion channel file.
	:ParFiles:NC:IonChans:KAConnr1.par	Potassium 'A' ion channel file.
	
	

HHDCNRo1.par
	#HHDCNRo1.par
	normal		Operation mode ("normal" or "voltage clamp").
	on			Injection mode ("on" or "off").
	-0.010		Excitatory reversal potential (V).
	-0.010		Inhibitory reversal potential (V).
	23e-12		Cell capacitance (Farads/cm^2).
	100e-3		Resting signal duration - used when finding V0(s).
	1e-5		Resting criteria, dV (V).
	
	# Ion channel parameters
	off		Print ion channel tables mode ("on" or "off").
	1.7e-9	Leakage conductance (S).
	0.0028	Leakage equilibrium potential (V).
	Rothman	Mode option ("user", "rothman").
	3		Number of ion channels.
	22.0	Operating temperature (degrees C).
	2.0		Leakge conductance Q10.
	-0.120	Initial voltage for tables (V).
	0.055	Final voltage for tables (V).
	0.001	Voltage step for tables (V).
	
	#Ion channels
	
	Na+_Rothman	Description.
	0.055		Equilibrium potential (V).
	325e-9		Base maximum conductance - 22oC (S).
	2.0			Conductance Q10.
	2			Activation exponent (int).
	#Current parameters
	# a		b	c	d	e	f	g	h	i	j	k
	0.36	3	1	49	-1	49	-3	0	1	0	0	alpha
	0	3	1	1	-0.4	3	1	58	-1	58	20	beta
	2.4	3	0	1	1	68	3	0.8	10	1	61.3	alpha
	0	3	1	1	3.60	3	0	1	1	21	-10	beta
	
	K+High_Rothman	Description.
	-0.077		Equilibrium potential (V).
	40e-9			Base maximum conductance - 22oC (S).
	2.5			Conductance Q10.
	1			Activation exponent (int).
	#Current parameters
	# a		b	c	d	e	f	g	h	i	j	k
	0.0282	3	1	9	-1	9	-12	0	1	0	0	alpha
	6	3	144	-30	6	3	0	1	1	62	1		beta
	0	0	0	0	0	0	0	0	0	0	0		alpha
	0	0	0	0	0	0	0	0	0	0	0		beta
	
	K+Low_Rothman	Description.
	-0.077		Equilibrium potential (V).
	20e-9		Base maximum conductance - 22oC (S).
	2.5			Conductance Q10.
	1			Activation exponent (int).
	#Current parameters
	# a		b	c	d	e	f	g	h	i	j	k
	0.107	3	0	1	1	33	-13.1	0	1	0	0	alpha
	0.0188	3	30	-30.3	0	1	0	0	1	0	1	beta
	0	0	0	0	0	0	0	0	0	0	0			alpha
	0	0	0	0	0	0	0	0	0	0	0			beta
	
	

HHDCNRo2.par
	#HHDCNRo2.par
	normal		Operation mode ("normal" or "voltage clamp").
	on			Injection mode ("on" or "off").
	-0.010		Excitatory reversal potential (V).
	-0.010		Inhibitory reversal potential (V).
	23e-12		Cell capacitance (Farads/cm^2).
	100e-3		Resting signal duration - used when finding V0(s).
	1e-5		Resting criteria, dV (V).
	
	# Ion channel parameters
	off		Print ion channel tables mode ("on" or "off").
	1.7e-9	Leakage conductance (S).
	0.0028	Leakage equilibrium potential (V).
	Rothman	Mode option ("user", "rothman").
	3		Number of ion channels.
	38.0	Operating temperature (degrees C).
	2.0		Leakge conductance Q10.
	-0.120	Initial voltage for tables (V).
	0.055	Final voltage for tables (V).
	0.001	Voltage step for tables (V).
	
	#Ion channels
	
	Na+_Rothman	Description.
	0.055		Equilibrium potential (V).
	325e-9		Base maximum conductance - 22oC (S).
	2.0			Conductance Q10.
	2			Activation exponent (int).
	#Current parameters
	# a		b	c	d	e	f	g	h	i	j	k
	0.36	3	1	49	-1	49	-3	0	1	0	0	alpha
	0	3	1	1	-0.4	3	1	58	-1	58	20	beta
	2.4	3	0	1	1	68	3	0.8	10	1	61.3	alpha
	0	3	1	1	3.60	3	0	1	1	21	-10	beta
	
	K+High_Rothman	Description.
	-0.077		Equilibrium potential (V).
	40e-9		Base maximum conductance - 22oC (S).
	2.5			Conductance Q10.
	1			Activation exponent (int).
	#Current parameters
	# a		b	c	d	e	f	g	h	i	j	k
	0.0282	3	1	9	-1	9	-12	0	1	0	0	alpha
	6	3	144	-30	6	3	0	1	1	62	1		beta
	0	0	0	0	0	0	0	0	0	0	0		alpha
	0	0	0	0	0	0	0	0	0	0	0		beta
	
	K+Low_Rothman	Description.
	-0.077		Equilibrium potential (V).
	20e-9		Base maximum conductance - 22oC (S).
	2.5			Conductance Q10.
	1			Activation exponent (int).
	#Current parameters
	# a		b	c	d	e	f	g	h	i	j	k
	0.107	3	0	1	1	33	-13.1	0	1	0	0	alpha
	0.0188	3	30	-30.3	0	1	0	0	1	0	1	beta
	0	0	0	0	0	0	0	0	0	0	0			alpha
	0	0	0	0	0	0	0	0	0	0	0			beta
	
	

MG92Stellate.par
	2.0e-3		Cell membrane time-constant, tm (s).
	0.9e-3		Potassium decay time-constant, tGk (s).
	20.0e-3		Threshold time-constant, tTh (s).
	0.3			Accommodation constant, c (dimensionless).
	0.017		Delayed rectifier postassium conductance, b (nano-Siemens).
	10.0		Cell resting Threshold, Th0 (mV).
	50.0		Action potential (mV).
	-10.0		Reversal potential of the potassium conductance, Ek (mV).
	-60.0		Cell resting potential Er (mV).
	

MG94Stellate.par
	1.0e-3		Cell membrane time-constant, tm (s).
	3.0e-3		Potassium decay time-constant, tGk (s).
	20.0e-3		Threshold time-constant, tTh (s).
	0.1			Accommodation constant, c (dimensionless).
	0.08		Delayed rectifier postassium conductance, b (nano-Siemens).
	15.0		Cell resting Threshold, Th0 (mV).
	50.0		Action potential (mV).
	-10.0		Reversal potential of the potassium conductance, Ek (mV).
	-60.0		Cell resting potential Er (mV).
	


previous next Up Title Contents